DIU-BLC
Introductions to Bioinformatics (Summer 20)
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Self Understanding
Welcome to Bioinformatics
Announcements
Announcements
Assessment Plan
Text Book
Reference Book
Sharing knowledge
Assessment
Week-1: Introduction to Bioinformatics
Discussion of Week-1
Introductory discussion
Week-2: Molecular and Cellular Biology
Discussion of Week-2
Week-3: Gene Structure and Splicing
Discussion of Week-3
Discussion
Quiz 1
Week-4: DNA Sequencing
Discussion of Week-4
Sanger Method
Week-5: Sequence Alignment
Global alignment
Week-6: Multiple Sequence Alignment
Discussion of Week-6
Self Understanding
Week-7: Mid-Term Exam
Mid Term Examination
Overlap Mid examination
Week-8: Gene Duplication and Read Mapping
Discussion of Week-8
Read Mapping
Week-9: Database Searching
Discussion of Week-9
Hash Table
Week-10: HMM- Forward Algorithm
Markove chain Model
Week 11: HMM-Viterbi Algorithm
Solving questions
Week-12: Phylogenetic Tree
Discussion of Week-12
Week-13: Maximum Likelihood Estimation
Discussion of Week-13
Final Assignment
Missing Quiz
Week-14: Final Examination
Next
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Course Overview
Sections
Welcome to Bioinformatics
1
Announcements
Forum
Announcements
Forum
Assessment Plan
File
Text Book
Folder
Reference Book
Folder
Sharing knowledge
Forum
Assessment
Assignment
Week-1: Introduction to Bioinformatics
2
Discussion of Week-1
Forum
Introductory discussion
Forum
Week-2: Molecular and Cellular Biology
3
Discussion of Week-2
Forum
Week-3: Gene Structure and Splicing
4
Discussion of Week-3
Forum
Discussion
Forum
Quiz 1
Week-4: DNA Sequencing
5
Discussion of Week-4
Forum
Sanger Method
Forum
Week-5: Sequence Alignment
6
Global alignment
Forum
Week-6: Multiple Sequence Alignment
7
Discussion of Week-6
Forum
Self Understanding
Forum
Week-7: Mid-Term Exam
8
Mid Term Examination
Assignment
Overlap Mid examination
Assignment
Week-8: Gene Duplication and Read Mapping
9
Discussion of Week-8
Forum
Read Mapping
Assignment
Week-9: Database Searching
10
Discussion of Week-9
Forum
Hash Table
Assignment
Week-10: HMM- Forward Algorithm
11
Markove chain Model
Forum
Week 11: HMM-Viterbi Algorithm
12
Solving questions
Forum
Week-12: Phylogenetic Tree
13
Discussion of Week-12
Forum
Week-13: Maximum Likelihood Estimation
14
Discussion of Week-13
Forum
Final Assignment
Missing Quiz
Assignment
Week-14: Final Examination
15
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Introductions to Bioinformatics (Summer 20)
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DIU
Faculty of Science and Information Technology
Computer Science and Engineering
CSE Summer 20
CSE 235 (AAK-202)
Week-6: Multiple Sequence Alignment
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Aliza Ahmed Khan
2 Jul 2020
Ramim Hossain
25 Aug 2020
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Announcements
Announcements
Assessment Plan
Text Book
Reference Book
Sharing knowledge
Assessment
Discussion of Week-1
Introductory discussion
Discussion of Week-2
Discussion of Week-3
Discussion
Quiz 1
Discussion of Week-4
Sanger Method
Global alignment
Discussion of Week-6
Mid Term Examination
Overlap Mid examination
Discussion of Week-8
Read Mapping
Discussion of Week-9
Hash Table
Markove chain Model
Solving questions
Discussion of Week-12
Discussion of Week-13
Final Assignment
Missing Quiz
Next Activity